This page contains links to raw 16S rRNA gene sequence data from our CDC-funded studies on using fecal minibioreactors and humanized microbiota mice to study the impact of interpersonal microbiome variation on disruption following antibiotic treatment and its potential impact on susceptibility to Clostridioides difficile infection.
16S rRNA Gene Sequencing Data links to:
- Sequence data for human fecal minibioreactors colonized with feces from a healthy adult, antibiotic-treated adult, healthy toddler (<3 years old), or a healthy elder (>65 years old) that were either untreated or treated with cefaclor, clindamycin or fidaxomicin.
- Sequence data for humanized microbiota Swiss-Webster mice colonized with feces from a healthy or antibiotic-treated adult that were either untreated or treated with cefaclor, clindamycin or fidaxomicin.
Whole Genome Sequencing Raw Data links to:
- Sequence data for human fecal minibioreactors colonized with feces from a healthy adult that was either untreated or treated with cefaclor, clindamycin or fidaxomicin.
- Sequence data for humanized microbiota Swiss-Webster mice colonized with feces from a healthy adult that were either untreated or treated with cefaclor, clindamycin or fidaxomicin.